Molecular modeling and simulation for
TUL
, Bc. level (
česká verze
)
Links
e-learning TUL
advanced Mgr. and Ph.D. version
SIMOLANT
, free software for teaching molecular dynamics and Monte Carlo
Talks
#
lecture
for print (10:1)
YouTube Channel
0
Popular introduction
simen00.10.pdf
Videolecture
1
Statistical thermodynamics
simen01.10.pdf
Part A
|
Part B
2
Models, force field
simen02.10.pdf
Part A
|
Part B
|
Energy units
3
Molecular dynamics, Verlet
simen03.10.pdf
Videolecture
|
+ Leap-frog
4
Gear methods, thermostats in MD
simen04.10.pdf
Videolecture
+ Buffon's needle
5
Monte Carlo
simen05.10.pdf
Videolecture
6
Molecular computer experiment
simen06.10.pdf
Videolecture
7
Mechanical and entropic quantites
simen07.10.pdf
Videolecture
8
Structural quantities
simen08.10.pdf
Videolecture
+ Laser pointer diffraction
9
System size, Coulomb forces
simen09.10.pdf
Videolecture
10
Other ensembles (optional)
simen10.10.pdf
12
Brownian dynamics, DPD, kinetic quantities, EMD vs. NEMD
simen12.10.pdf
Videolecture
+
Nano calculation
simen+.10.pdf
Videolecture
w1
Simulation experiment: Clausius-Clapeyron equation in 2D
simenw1.10.pdf
Videolecture
w2
Three computer experiments
simenw2.10.pdf
Melting of NaCl
Solute in water
Coalescence of droplets
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